salinity tolerance is a genetically and physiologically complex trait, controlled by quantitative trait loci (qtls). in order to map the qtls associated with agronomic and physiological traits, 149 doubled haploid lines derived from a cross between clipper (salt susceptible) and sahara 3771 (salt tolerant) barley genotypes were evaluated under natural saline-stress and non-stress conditions usi...

In bread wheat, QTL interval mapping was conducted for nine important drought responsive agronomic traits. For this purpose, a doubled haploid (DH) mapping population derived from Kukri/Excalibur was grown over three years at four separate locations in India, both under irrigated and rain-fed environments. Single locus analysis using composite interval mapping (CIM) allowed detection of 98 QTL,...

to compare different qtl mapping methods, a population with genotypic and phenotypic data was simulated. in bayesian approach, all information of markers can be used along with combination of distributions of snp markers. it is assumed that most of the markers (95%) have minor effects and a few numbers of markers (5%) exert major effects. the simulated population included a basic population of ...

the availability of the saturated dna marker maps in livestock has made it possible to locate quantitative trait loci (qtl) in these domestic animals. the objective of this research was to investigate the principles of applying the simple regression for qtl analysis in paternal half-sib (phs) design commonly used in livestock species. the theoretical aspects of the simple regression approach fo...

A whole-genome scan was conducted to map quantitative trait loci (QTL) for BSE resistance or susceptibility. Cows from four half-sib families were included and 173 microsatellite markers were used to construct a 2835-cM (Kosambi) linkage map covering 29 autosomes and the pseudoautosomal region of the sex chromosome. Interval mapping by linear regression was applied and extended to a multiple-QT...

Quantitative trait locus (QTL) mapping is usually performed using markers that follow a Mendelian segregation ratio. We developed a new method of QTL mapping that can use markers with segregation distortion (non-Mendelian markers). An EM (expectation-maximization) algorithm is used to estimate QTL and SDL (segregation distortion loci) parameters. The joint analysis of QTL and SDL is particularl...

Grain oil content is negatively correlated with starch content in maize in general. In this study, 282 and 263 recombinant inbred lines (RIL) developed from two crosses between one high-oil maize inbred and two normal dent maize inbreds were evaluated for grain starch content and its correlation with oil content under four environments. Single-trait QTL for starch content in single-population a...

SINGLE VERSUS MULTIPLE MARKERS ........................................................................................................ 45 DETERMINING ASSOCIATIONS BETWEEN GENETIC MARKERS AND QTL WITH TWO MARKERS ................... 45 INTERVAL MAPPING .................................................................................................................................. 50 Maximum Li...